Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate sugar epimerase/dehydratase | I596_RS07940 | P39853 | Positive | 1967742 - 1969631 | 68953.0 |
| utp--glucose-1-phosphate uridylyltransferase galu | I596_RS07945 | Q9I291 | Positive | 1969751 - 1970623 | 31645.4 |
| plp-dependent aspartate aminotransferase family protein | I596_RS07950 | P13254 | Positive | 1970706 - 1971872 | 41682.3 |
| ribonuclease g | I596_RS07955 | A0A0H3NGK0 | Positive | 1971940 - 1973418 | 54949.5 |
| yhdp family protein | I596_RS07960 | Not Available | Positive | 1973437 - 1977282 | 135863.0 |
| metalloprotease tldd | I596_RS07965 | P0AGG9 | Positive | 1977357 - 1978799 | 49783.5 |
| ribosome biogenesis factor yjga | I596_RS07970 | Q4UWJ4 | Negative | 1978853 - 1979380 | 19875.6 |
| metalloprotease pmba | I596_RS07975 | P0AFK1 | Positive | 1979395 - 1980753 | 48504.4 |
| duf4870 domain-containing protein | I596_RS07980 | Not Available | Positive | 1980945 - 1981340 | 14360.8 |
| dna repair protein recn | I596_RS07985 | Q87BS5 | Negative | 1981378 - 1983051 | 59631.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
