Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydratase | I596_RS07890 | P27603 | Positive | 1957792 - 1958898 | 40544.4 |
| histidinol-phosphate transaminase | I596_RS07895 | Q9HZ68 | Positive | 1958895 - 1960007 | 39039.8 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | I596_RS07900 | B0RUW1 | Positive | 1960105 - 1961418 | 45114.4 |
| universal stress protein | I596_RS07905 | Not Available | Negative | 1961429 - 1961860 | 14576.5 |
| (d)cmp kinase | I596_RS07910 | B4SSV1 | Positive | 1962158 - 1962847 | 23848.7 |
| 30s ribosomal protein s1 | I596_RS07915 | Q9HZ71 | Positive | 1963001 - 1964677 | 61644.4 |
| integration host factor subunit beta | I596_RS07920 | Q8PK78 | Positive | 1964677 - 1965096 | 15079.0 |
| lipopolysaccharide assembly protein lapa domain-containing protein | I596_RS07925 | Not Available | Positive | 1965151 - 1965441 | 9796.95 |
| lipopolysaccharide assembly protein lapb | I596_RS07930 | P0AB60 | Positive | 1965438 - 1966610 | 43602.4 |
| glycosyltransferase family 4 protein | I596_RS07935 | A0R211 | Positive | 1966621 - 1967745 | 39348.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
