Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa-binding protein | I596_RS07840 | O01805 | Negative | 1944467 - 1944751 | 10452.4 |
| phasin family protein | I596_RS18745 | Not Available | Negative | 1944836 - 1945555 | 24925.8 |
| penicillin-binding protein 1c | I596_RS07850 | P76577 | Negative | 1945671 - 1948016 | 84085.4 |
| protease inhibitor i42 family protein | I596_RS07855 | Not Available | Positive | 1948143 - 1948568 | 14736.5 |
| alpha-2-macroglobulin | I596_RS07860 | Q9PDX7 | Negative | 1948652 - 1953607 | 179506.0 |
| polyhydroxyalkanoic acid system family protein | I596_RS07865 | Not Available | Negative | 1953728 - 1954003 | 10239.4 |
| fha domain-containing protein | I596_RS07870 | Not Available | Positive | 1954081 - 1954887 | 27777.4 |
| sulfite oxidase heme-binding subunit yedz | I596_RS07875 | Q3BUZ5 | Negative | 1954867 - 1955502 | 23721.9 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | I596_RS07880 | Q8PA98 | Negative | 1955502 - 1956491 | 36549.6 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | I596_RS07885 | B4SP45 | Positive | 1956672 - 1957754 | 38584.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
