Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iia | I596_RS07790 | Q9HVV4 | Negative | 1936484 - 1936951 | 16371.7 |
| ribosome hibernation-promoting factor, hpf/yfia family | I596_RS07795 | P17161 | Negative | 1936984 - 1937304 | 11825.3 |
| rna polymerase factor sigma-54 | I596_RS07800 | P26979 | Negative | 1937450 - 1938877 | 52230.4 |
| lps export abc transporter atp-binding protein | I596_RS07805 | P0A9V3 | Negative | 1939060 - 1939779 | 26272.1 |
| lipopolysaccharide transport periplasmic protein lpta | I596_RS07810 | Not Available | Negative | 1939779 - 1940381 | 20658.4 |
| lps export abc transporter periplasmic protein lptc | I596_RS07815 | Not Available | Negative | 1940341 - 1940919 | 21406.4 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | I596_RS07820 | Q8ZB47 | Negative | 1940916 - 1941458 | 19698.6 |
| kpsf/gutq family sugar-phosphate isomerase | I596_RS07825 | Q9HVW0 | Negative | 1941557 - 1942579 | 35950.8 |
| bola family protein | I596_RS07830 | P73055 | Positive | 1942754 - 1942987 | 8193.93 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | I596_RS07835 | B8GMK2 | Positive | 1943074 - 1944333 | 44538.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
