Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(13) synthase trud | I596_RS07690 | Q8PLR6 | Positive | 1917459 - 1918502 | 37350.2 |
| transcription elongation factor greb | I596_RS07695 | Q8P7P8 | Negative | 1918478 - 1918990 | 19081.5 |
| helicase hera-like domain-containing protein | I596_RS07700 | P39342 | Negative | 1919040 - 1920554 | 54128.5 |
| transglycosylase slt domain-containing protein | I596_RS07705 | Not Available | Positive | 1920719 - 1922248 | 54707.1 |
| hypothetical protein | I596_RS07710 | Not Available | Negative | 1922301 - 1922738 | 16686.2 |
| archaetidylserine decarboxylase | I596_RS07715 | Q8PJ17 | Negative | 1922993 - 1923832 | 30792.4 |
| sco family protein | I596_RS07720 | P47206 | Negative | 1923829 - 1924482 | 23645.2 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | I596_RS07725 | Q8P7Q8 | Positive | 1924547 - 1925467 | 32835.0 |
| chorismate synthase | I596_RS07730 | Q8PJ20 | Positive | 1925470 - 1926570 | 38950.3 |
| d-glycerate dehydrogenase | I596_RS07735 | B6YWH0 | Positive | 1926567 - 1927550 | 34122.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
