Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv subunit b | I596_RS07640 | Q9HUJ8 | Negative | 1906544 - 1908436 | 69395.9 |
| multidrug transporter subunit mdtd | I596_RS07645 | A8GHR1 | Positive | 1908528 - 1909931 | 48857.7 |
| c40 family peptidase | I596_RS07650 | P23898 | Negative | 1909943 - 1910545 | 21558.2 |
| ctp synthase | I596_RS07655 | B2I935 | Positive | 1910788 - 1912458 | 62044.1 |
| 3-deoxy-8-phosphooctulonate synthase | I596_RS07660 | Q3BUT2 | Positive | 1912455 - 1913282 | 29615.9 |
| hypothetical protein | I596_RS07665 | Not Available | Positive | 1913331 - 1914536 | 42679.2 |
| phosphopyruvate hydratase | I596_RS07670 | B4SR86 | Positive | 1914568 - 1915857 | 45538.1 |
| cell division protein ftsb | I596_RS07675 | Q8PLR9 | Positive | 1915867 - 1916169 | 11102.5 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | I596_RS07680 | Q3BUS8 | Positive | 1916166 - 1916894 | 25640.9 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS07685 | Q8PLR7 | Positive | 1916911 - 1917378 | 16487.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
