Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | I596_RS07590 | Q9I2V5 | Positive | 1894322 - 1896907 | 92617.3 |
| tetratricopeptide repeat protein | I596_RS07595 | Q8RVB2 | Positive | 1896951 - 1899191 | 80253.9 |
| high frequency lysogenization protein hfld | I596_RS07600 | B8GSM0 | Negative | 1899199 - 1899822 | 23018.1 |
| trna 2-thiouridine(34) synthase mnma | I596_RS07605 | B2FQX2 | Negative | 1899815 - 1900936 | 40308.6 |
| nudix hydrolase | I596_RS07610 | A7ZKS4 | Negative | 1900941 - 1901444 | 18376.7 |
| atp-dependent clp protease adapter clps | I596_RS07615 | Q8PL06 | Positive | 1901525 - 1901857 | 12682.2 |
| atp-dependent clp protease atp-binding subunit clpa | I596_RS07620 | P0ABI1 | Positive | 1901900 - 1904176 | 83343.4 |
| ycjf family protein | I596_RS07625 | Not Available | Positive | 1904330 - 1905262 | 32979.7 |
| duf488 domain-containing protein | I596_RS07630 | P76243 | Negative | 1905330 - 1905677 | 13387.0 |
| uracil-dna glycosylase family protein | I596_RS07635 | O86222 | Negative | 1905710 - 1906228 | 18666.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
