Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | I596_RS07540 | Q2P1U6 | Positive | 1881248 - 1882813 | 58479.6 |
| two-component system response regulator | I596_RS07545 | Q4UU85 | Positive | 1883180 - 1884232 | 39532.0 |
| atp-binding protein | I596_RS07550 | P0C0F6 | Positive | 1884340 - 1886493 | 77632.8 |
| crotonase/enoyl-coa hydratase family protein | I596_RS07555 | O49809 | Negative | 1886541 - 1887464 | 34120.2 |
| 3-hydroxyacyl-acp dehydratase fabz family protein | I596_RS07560 | Not Available | Negative | 1887683 - 1888126 | 16407.7 |
| long-chain-fatty-acid--coa ligase | I596_RS07565 | Q8XDR6 | Negative | 1888237 - 1889922 | 61761.5 |
| nuclear transport factor 2 family protein | I596_RS07570 | Not Available | Positive | 1890120 - 1890563 | 16054.2 |
| aconitate hydratase acna | I596_RS07575 | Q9I3F5 | Negative | 1890631 - 1893387 | 98670.2 |
| abrb/maze/spovt family dna-binding domain-containing protein | I596_RS07580 | Not Available | Positive | 1893609 - 1893863 | 9048.89 |
| type ii toxin-antitoxin system vapc family toxin | I596_RS07585 | Not Available | Positive | 1893874 - 1894275 | 14385.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
