Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS07490 | Not Available | Negative | 1867886 - 1868926 | 36215.7 |
| 2og-fe(ii) oxygenase | I596_RS07495 | Not Available | Negative | 1869096 - 1869812 | 26623.7 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | I596_RS07500 | B8GNX4 | Positive | 1870004 - 1871143 | 39985.6 |
| hypothetical protein | I596_RS07505 | Not Available | Positive | 1871153 - 1871503 | 12019.6 |
| carbamoyl-phosphate synthase large subunit | I596_RS07510 | P58943 | Positive | 1871487 - 1874711 | 117029.0 |
| transcription elongation factor grea | I596_RS07515 | Q8PLD9 | Positive | 1874711 - 1875187 | 17336.5 |
| hypothetical protein | I596_RS07520 | Not Available | Positive | 1875206 - 1876162 | 34314.6 |
| single-stranded-dna-specific exonuclease recj | I596_RS07525 | P39693 | Positive | 1876123 - 1877895 | 62488.3 |
| diguanylate cyclase | I596_RS19220 | P54595 | Negative | 1878006 - 1879892 | 66881.3 |
| peptide chain release factor 2 | I596_RS07535 | Q3BUB7 | Positive | 1880092 - 1881217 | 42034.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
