Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein rada | I596_RS07440 | P96963 | Positive | 1858649 - 1860025 | 48269.6 |
| inner membrane protein ypjd | I596_RS07445 | P45674 | Negative | 1860083 - 1860883 | 28699.6 |
| signal recognition particle protein | I596_RS07450 | P0AGD9 | Positive | 1860991 - 1862367 | 49858.4 |
| 30s ribosomal protein s16 | I596_RS07455 | B4SPH1 | Positive | 1862547 - 1862810 | 9835.92 |
| ribosome maturation factor rimm | I596_RS07460 | Q4US83 | Positive | 1862816 - 1863325 | 19183.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | I596_RS07465 | Q3BVY8 | Positive | 1863345 - 1864118 | 28279.6 |
| 50s ribosomal protein l19 | I596_RS07470 | B2I6A9 | Positive | 1864157 - 1864525 | 13390.2 |
| molecular chaperone htpg | I596_RS07475 | B7JAR2 | Positive | 1864679 - 1866562 | 69368.5 |
| hypothetical protein | I596_RS07480 | Not Available | Negative | 1866640 - 1867173 | 18815.2 |
| rna polymerase sigma factor | I596_RS07485 | Not Available | Negative | 1867166 - 1867717 | 20410.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
