Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | I596_RS07390 | Q6TMA3 | Negative | 1851052 - 1851840 | 26926.3 |
| hypothetical protein | I596_RS07395 | Not Available | Negative | 1851840 - 1852172 | 12157.1 |
| hypothetical protein | I596_RS07400 | Not Available | Negative | 1852165 - 1852476 | 10768.7 |
| asparagine--trna ligase | I596_RS07405 | Q87A82 | Negative | 1852476 - 1853885 | 51976.7 |
| iron-sulfur cluster assembly accessory protein | I596_RS07410 | B4EZU6 | Positive | 1854072 - 1854407 | 12041.0 |
| 30s ribosomal protein s6 | I596_RS07415 | Q8PM14 | Positive | 1854566 - 1855030 | 17472.5 |
| 30s ribosomal protein s18 | I596_RS07420 | A4VQM9 | Positive | 1855064 - 1855291 | 8851.77 |
| 50s ribosomal protein l9 | I596_RS07425 | Q8PM12 | Positive | 1855412 - 1855858 | 15614.7 |
| replicative dna helicase | I596_RS07430 | Q8FB22 | Positive | 1856058 - 1857446 | 50963.9 |
| alanine racemase | I596_RS07435 | A3QI45 | Positive | 1857570 - 1858649 | 38553.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
