Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | I596_RS07340 | Q8PP47 | Positive | 1842611 - 1843501 | 32509.3 |
| thymidylate synthase | I596_RS07345 | Q4UR35 | Positive | 1843501 - 1844295 | 29969.8 |
| dihydrofolate reductase | I596_RS07350 | P12833 | Positive | 1844298 - 1844786 | 17796.4 |
| cysteine dioxygenase family protein | I596_RS07355 | Not Available | Positive | 1844907 - 1845515 | 22337.5 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | I596_RS07360 | Q3BX84 | Negative | 1845516 - 1846364 | 31480.2 |
| co2+/mg2+ efflux protein apag | I596_RS07365 | Q5P714 | Negative | 1846364 - 1846747 | 13941.4 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | I596_RS07370 | B0RUI3 | Negative | 1846850 - 1847659 | 29172.9 |
| dmt family transporter | I596_RS07375 | Not Available | Positive | 1847733 - 1848608 | 30943.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | I596_RS07380 | B8GMX6 | Negative | 1848613 - 1849602 | 33936.4 |
| peptidylprolyl isomerase | I596_RS07385 | Q3BX80 | Negative | 1849638 - 1850954 | 48778.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
