Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase family protein | I596_RS00700 | Not Available | Negative | 176339 - 176902 | 20241.1 |
| amidohydrolase | I596_RS00705 | P80092 | Negative | 177135 - 178448 | 46323.4 |
| energy transducer tonb | I596_RS18880 | Not Available | Negative | 178561 - 179007 | 15611.5 |
| tonb system transport protein exbd | I596_RS00715 | Q05606 | Negative | 179313 - 179741 | 15398.3 |
| tonb-system energizer exbb | I596_RS00720 | Q05605 | Negative | 179756 - 180472 | 24726.9 |
| tonb-dependent receptor domain-containing protein | I596_RS00725 | P45114 | Positive | 180772 - 182883 | 74225.3 |
| hypothetical protein | I596_RS00730 | Not Available | Positive | 182952 - 183632 | 23607.4 |
| ggdef domain-containing protein | I596_RS00735 | P0AA90 | Positive | 183992 - 185926 | 69745.8 |
| response regulator transcription factor | I596_RS00740 | G3XCY6 | Positive | 186199 - 186897 | 25202.2 |
| sensor histidine kinase | I596_RS00745 | Not Available | Negative | 186905 - 188296 | 50285.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
