Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| assimilatory sulfite reductase (nadph) flavoprotein subunit | I596_RS07245 | A6TD49 | Negative | 1815460 - 1817274 | 65231.3 |
| opro/oprp family phosphate-selective porin | I596_RS07250 | Not Available | Positive | 1817526 - 1818713 | 43610.0 |
| gtp cyclohydrolase fole2 | I596_RS07255 | Q5R041 | Positive | 1818823 - 1819773 | 34806.2 |
| phosphoglycerate dehydrogenase | I596_RS07260 | P0A9T2 | Negative | 1819825 - 1821060 | 43964.1 |
| fad-binding oxidoreductase | I596_RS07265 | P0DV35 | Positive | 1821243 - 1822634 | 49703.8 |
| trna adenosine(34) deaminase tada | I596_RS07270 | P68398 | Positive | 1822744 - 1823208 | 16085.3 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | I596_RS07275 | Q9HZP5 | Negative | 1823193 - 1824878 | 60546.4 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | I596_RS07280 | B4SLF7 | Negative | 1825122 - 1826018 | 32578.1 |
| co-chaperone djla | I596_RS07285 | Q7N8V3 | Positive | 1826290 - 1827081 | 28697.6 |
| ribulose-phosphate 3-epimerase | I596_RS07290 | P45455 | Positive | 1827087 - 1827761 | 23768.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
