Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| blai/meci/copy family transcriptional regulator | I596_RS07195 | Not Available | Positive | 1805340 - 1805744 | 14703.8 |
| m56 family metallopeptidase | I596_RS07200 | Not Available | Positive | 1805741 - 1808011 | 80270.8 |
| Trna-ser | Not Available | Not Available | Positive | 1808102 - 1808191 | Not Available |
| duf6165 family protein | I596_RS07210 | Not Available | Positive | 1808301 - 1808693 | 14726.6 |
| hypothetical protein | I596_RS07215 | Not Available | Positive | 1808851 - 1809153 | 11035.7 |
| alanine--glyoxylate aminotransferase family protein | I596_RS07220 | Q54GT6 | Positive | 1809339 - 1810457 | 39207.5 |
| glutathione s-transferase family protein | I596_RS07225 | Not Available | Positive | 1810494 - 1811105 | 23098.5 |
| bifunctional sulfate adenylyltransferase/adenylylsulfate kinase | I596_RS07230 | Q4I1N3 | Negative | 1811187 - 1812932 | 63938.2 |
| phosphoadenylyl-sulfate reductase | I596_RS07235 | Q4UY09 | Negative | 1813035 - 1813757 | 27713.1 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | I596_RS07240 | Q1D9W9 | Negative | 1813754 - 1815460 | 62094.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
