Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chase domain-containing protein | I596_RS18055 | Q9LCC2 | Positive | 1778567 - 1781281 | 98396.5 |
| response regulator | I596_RS07100 | Not Available | Positive | 1781262 - 1781720 | 17516.1 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein | I596_RS07105 | O66043 | Negative | 1781754 - 1783229 | 52259.6 |
| sdr family oxidoreductase | I596_RS07110 | Q9Y140 | Negative | 1783301 - 1784098 | 28755.0 |
| cysteine synthase a | I596_RS07115 | P50867 | Negative | 1784173 - 1785195 | 35237.8 |
| peroxiredoxin | I596_RS07120 | Q54SE2 | Negative | 1785246 - 1785881 | 23453.8 |
| siroheme synthase cysg | I596_RS07125 | A9HZV6 | Negative | 1785913 - 1787361 | 51094.6 |
| lysr substrate-binding domain-containing protein | I596_RS07130 | P0A9F5 | Positive | 1787614 - 1788618 | 36225.8 |
| diguanylate cyclase domain-containing protein | I596_RS07135 | P0AAP2 | Negative | 1788725 - 1790824 | 76278.0 |
| 30s ribosomal protein s12 methylthiotransferase rimo | I596_RS07140 | B2SWC0 | Positive | 1790928 - 1792253 | 48170.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
