Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum site-determining protein minc | I596_RS07050 | Q4US07 | Negative | 1766385 - 1767164 | 27319.0 |
| gnat family n-acetyltransferase | I596_RS07055 | Not Available | Negative | 1767168 - 1767779 | 22828.3 |
| sensor histidine kinase | I596_RS07060 | P94438 | Positive | 1767968 - 1769158 | 44144.2 |
| response regulator transcription factor | I596_RS07065 | P94439 | Positive | 1769155 - 1769796 | 22824.9 |
| srpbcc family protein | I596_RS07070 | Not Available | Positive | 1770016 - 1771224 | 43564.4 |
| is481 family transposase | I596_RS07075 | Not Available | Negative | 1771595 - 1772719 | 42561.0 |
| hypothetical protein | I596_RS18735 | Not Available | Negative | 1773134 - 1773289 | 5631.55 |
| aldehyde dehydrogenase family protein | I596_RS07080 | Q53197 | Negative | 1773355 - 1774797 | 52068.4 |
| exodeoxyribonuclease vii large subunit | I596_RS07085 | Q8PJW7 | Negative | 1774794 - 1776185 | 51020.9 |
| bifunctional diguanylate cyclase/phosphodiesterase | I596_RS07090 | Not Available | Positive | 1776348 - 1778558 | 79918.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
