Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | I596_RS07000 | Not Available | Negative | 1757751 - 1758179 | 15448.6 |
| voc family protein | I596_RS07005 | Not Available | Negative | 1758229 - 1758654 | 15162.0 |
| ycii family protein | I596_RS07010 | Not Available | Positive | 1758829 - 1759218 | 14010.7 |
| multidrug effflux mfs transporter | I596_RS07015 | P45123 | Positive | 1759338 - 1760540 | 42053.9 |
| lysr family transcriptional regulator | I596_RS07020 | P30864 | Positive | 1760606 - 1761592 | 36449.2 |
| m2 family metallopeptidase | I596_RS07025 | Q9GLN7 | Negative | 1761617 - 1763539 | 71318.3 |
| llm class flavin-dependent oxidoreductase | I596_RS07030 | P0ADV6 | Negative | 1763641 - 1764624 | 35516.5 |
| hypothetical protein | I596_RS07035 | Not Available | Negative | 1764698 - 1765153 | 16532.6 |
| cell division topological specificity factor mine | I596_RS07040 | A1WXE1 | Negative | 1765179 - 1765457 | 10405.6 |
| septum site-determining protein mind | I596_RS07045 | P0AEZ5 | Negative | 1765461 - 1766273 | 29161.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
