Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase phox | I596_RS06950 | Not Available | Positive | 1749568 - 1750881 | 46599.4 |
| Trna-met | Not Available | Not Available | Positive | 1751027 - 1751103 | Not Available |
| duf1508 domain-containing protein | I596_RS18730 | Not Available | Negative | 1751150 - 1751359 | 8012.35 |
| low affinity iron permease family protein | I596_RS06965 | Not Available | Negative | 1751436 - 1751957 | 18968.0 |
| duf3182 family protein | I596_RS06970 | Not Available | Positive | 1752354 - 1753460 | 39335.6 |
| s9 family peptidase | I596_RS06975 | Not Available | Positive | 1753457 - 1754287 | 30663.6 |
| carbonic anhydrase | I596_RS06980 | P9WPJ8 | Positive | 1754394 - 1755002 | 21820.2 |
| cysteine hydrolase family protein | I596_RS06985 | Not Available | Negative | 1755150 - 1755755 | 21256.1 |
| rna polymerase sigma factor | I596_RS06990 | Q52997 | Negative | 1755945 - 1757207 | 45370.7 |
| ycii family protein | I596_RS06995 | Not Available | Negative | 1757322 - 1757747 | 15353.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
