Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6249 domain-containing protein | I596_RS06900 | Not Available | Negative | 1738068 - 1738397 | 12109.0 |
| rna polymerase sigma factor | I596_RS06905 | Not Available | Positive | 1738508 - 1739119 | 22639.2 |
| hypothetical protein | I596_RS06910 | Not Available | Positive | 1739116 - 1739571 | 15849.2 |
| winged helix-turn-helix domain-containing protein | I596_RS06915 | Not Available | Negative | 1739631 - 1742036 | 85935.7 |
| duf1684 domain-containing protein | I596_RS06920 | Not Available | Negative | 1742103 - 1743005 | 32255.2 |
| hypothetical protein | I596_RS06925 | Not Available | Negative | 1743106 - 1744215 | 39139.7 |
| dna helicase recq | I596_RS06930 | P15043 | Positive | 1744470 - 1746281 | 66464.4 |
| cyclopropane fatty acyl phospholipid synthase | I596_RS06935 | P0A9H8 | Negative | 1746327 - 1747445 | 42585.5 |
| fluoride efflux transporter crcb | I596_RS06940 | Q7NWP1 | Negative | 1747506 - 1747895 | 13186.5 |
| alkaline phosphatase phox | I596_RS06945 | Not Available | Negative | 1747996 - 1749345 | 47182.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
