Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | I596_RS06850 | Not Available | Positive | 1726123 - 1726494 | 12910.8 |
| tonb-dependent siderophore receptor | I596_RS06855 | Q6LLU3 | Positive | 1726648 - 1728660 | 74316.9 |
| molybdopterin-dependent oxidoreductase | I596_RS06860 | Not Available | Positive | 1728672 - 1729283 | 21408.2 |
| hypothetical protein | I596_RS06865 | Not Available | Negative | 1729303 - 1730826 | 51940.9 |
| duf1349 domain-containing protein | I596_RS06870 | Not Available | Negative | 1731495 - 1732367 | 32504.5 |
| hamp domain-containing sensor histidine kinase | I596_RS06875 | P40719 | Negative | 1732500 - 1733873 | 49516.6 |
| response regulator transcription factor | I596_RS06880 | Q9HV32 | Negative | 1733873 - 1734538 | 24086.0 |
| hypothetical protein | I596_RS06885 | Not Available | Positive | 1734676 - 1735593 | 32371.1 |
| class i sam-dependent methyltransferase | I596_RS06890 | Not Available | Positive | 1735602 - 1736321 | 25430.2 |
| serine hydrolase | I596_RS06895 | Q8XBJ0 | Negative | 1736370 - 1738031 | 59730.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
