Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low molecular weight protein-tyrosine-phosphatase | I596_RS06650 | P41893 | Positive | 1686044 - 1686520 | 16787.3 |
| redoxin family protein | I596_RS06655 | Q8VZ10 | Positive | 1686517 - 1687944 | 49934.6 |
| excinuclease abc subunit uvrc | I596_RS06660 | B0RSI3 | Positive | 1688057 - 1689883 | 66515.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | I596_RS06665 | Q322L9 | Positive | 1689897 - 1690487 | 21523.8 |
| Trna-gly | Not Available | Not Available | Positive | 1690754 - 1690829 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 1690930 - 1691003 | Not Available |
| hypothetical protein | I596_RS06680 | Not Available | Negative | 1691323 - 1692597 | 45138.7 |
| cation:proton antiporter | I596_RS06685 | P72973 | Positive | 1693070 - 1694320 | 43339.6 |
| hypothetical protein | I596_RS06690 | Not Available | Positive | 1694605 - 1694817 | 7642.66 |
| endonuclease/exonuclease/phosphatase family protein | I596_RS06695 | P0AAW3 | Positive | 1695012 - 1695836 | 30864.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
