Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vcbs repeat-containing protein | I596_RS06600 | Not Available | Positive | 1671293 - 1672606 | 45499.4 |
| hypothetical protein | I596_RS06605 | Not Available | Positive | 1672719 - 1673999 | 43212.9 |
| dihydrolipoyl dehydrogenase | I596_RS06610 | P0A9P2 | Positive | 1674050 - 1675843 | 61682.4 |
| hypothetical protein | I596_RS06615 | Not Available | Positive | 1676136 - 1678145 | 68893.2 |
| hypothetical protein | I596_RS06620 | Not Available | Positive | 1678401 - 1679702 | 45546.0 |
| ectonucleotide pyrophosphatase/phosphodiesterase | I596_RS06625 | O94323 | Positive | 1679794 - 1681044 | 45079.4 |
| hypothetical protein | I596_RS06630 | Not Available | Positive | 1681139 - 1682839 | 60556.9 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | I596_RS06635 | Q2P3M7 | Positive | 1682914 - 1684173 | 44600.8 |
| dmt family transporter | I596_RS06640 | A6WUW2 | Negative | 1684174 - 1685100 | 33381.0 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | I596_RS06645 | B4SQQ0 | Positive | 1685268 - 1686047 | 27066.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
