Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | I596_RS06550 | Not Available | Negative | 1658828 - 1659409 | 21842.9 |
| alpha/beta hydrolase | I596_RS06555 | Not Available | Positive | 1659477 - 1659989 | 18048.5 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | I596_RS06560 | Q3A2U5 | Positive | 1659992 - 1662157 | 78993.0 |
| hypothetical protein | I596_RS06565 | Not Available | Positive | 1662287 - 1662742 | 17160.0 |
| class i sam-dependent methyltransferase | I596_RS06570 | Not Available | Positive | 1662924 - 1663577 | 23621.7 |
| cbs domain-containing protein | I596_RS06575 | Q9LEV3 | Negative | 1663593 - 1664021 | 15256.6 |
| glycosyltransferase family 2 protein | I596_RS06580 | Q55487 | Negative | 1664018 - 1665019 | 37439.8 |
| m1 family aminopeptidase | I596_RS06585 | Not Available | Negative | 1665139 - 1668717 | 134174.0 |
| abc transporter atp-binding protein | I596_RS06590 | Not Available | Negative | 1668728 - 1669618 | 32280.1 |
| dihydrolipoyllysine-residue acetyltransferase | I596_RS06595 | Q59098 | Positive | 1669847 - 1671250 | 48566.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
