Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | I596_RS06500 | Not Available | Positive | 1646762 - 1647658 | 32065.9 |
| hit family protein | I596_RS18045 | Not Available | Positive | 1648152 - 1648661 | 18909.5 |
| dna oxidative demethylase alkb | I596_RS06510 | P37462 | Negative | 1648783 - 1649427 | 22841.4 |
| choice-of-anchor q domain-containing protein | I596_RS06515 | Not Available | Negative | 1649606 - 1651165 | 51787.6 |
| duf4394 domain-containing protein | I596_RS06520 | Not Available | Negative | 1651222 - 1652817 | 56298.5 |
| winged helix-turn-helix domain-containing protein | I596_RS06525 | Not Available | Negative | 1653019 - 1655445 | 85893.6 |
| formate-dependent phosphoribosylglycinamide formyltransferase | I596_RS06530 | A1K4Y1 | Positive | 1655568 - 1656752 | 42045.4 |
| arginyltransferase | I596_RS06535 | B4SP02 | Negative | 1656739 - 1657467 | 27945.2 |
| hypothetical protein | I596_RS06540 | Not Available | Negative | 1657522 - 1657911 | 14409.4 |
| acyl-coa thioesterase ii | I596_RS06545 | P0AGG3 | Negative | 1657918 - 1658781 | 32102.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
