Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | I596_RS06450 | Q9HU16 | Positive | 1632840 - 1634120 | 45040.6 |
| trypsin-like serine protease | I596_RS06455 | Not Available | Negative | 1634150 - 1634905 | 25987.0 |
| imp dehydrogenase | I596_RS06460 | P31002 | Positive | 1635072 - 1636526 | 52137.9 |
| hypothetical protein | I596_RS06465 | Not Available | Positive | 1636535 - 1637134 | 21636.8 |
| glutamine-hydrolyzing gmp synthase | I596_RS06470 | Q8PK88 | Positive | 1637139 - 1638704 | 56740.4 |
| hypothetical protein | I596_RS06475 | Not Available | Positive | 1639324 - 1639719 | 14508.9 |
| tolc family protein | I596_RS06480 | Not Available | Positive | 1639791 - 1641098 | 47389.2 |
| efflux rnd transporter periplasmic adaptor subunit | I596_RS06485 | Q8CWA2 | Positive | 1641095 - 1642591 | 52361.6 |
| efflux rnd transporter permease subunit | I596_RS06490 | Q8FK36 | Positive | 1642588 - 1645749 | 113424.0 |
| sdr family oxidoreductase | I596_RS06495 | Q8A945 | Negative | 1645908 - 1646660 | 26380.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
