Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family dna-binding protein | I596_RS06400 | Q9X5X4 | Negative | 1623613 - 1624080 | 17061.6 |
| copper resistance protein b | I596_RS06405 | P12375 | Negative | 1624213 - 1625346 | 41021.6 |
| copper resistance system multicopper oxidase | I596_RS06410 | P59571 | Negative | 1625343 - 1627166 | 66780.5 |
| hypothetical protein | I596_RS06415 | Not Available | Negative | 1627311 - 1627667 | 11726.2 |
| duf1244 domain-containing protein | I596_RS06420 | Not Available | Negative | 1627737 - 1628033 | 11355.4 |
| m12 family metallo-peptidase | I596_RS06425 | Not Available | Negative | 1628115 - 1629455 | 46240.0 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | I596_RS06430 | Q8PK86 | Positive | 1629576 - 1630430 | 30358.7 |
| trap transporter tatt component family protein | I596_RS06435 | Not Available | Positive | 1630461 - 1631318 | 30345.4 |
| trap transporter substrate-binding protein dctp | I596_RS06440 | Q16BC9 | Positive | 1631327 - 1632343 | 36316.8 |
| trap transporter small permease | I596_RS06445 | Not Available | Positive | 1632340 - 1632843 | 17889.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
