Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | I596_RS18040 | Not Available | Positive | 1612425 - 1613363 | 32919.2 |
| tetratricopeptide repeat protein | I596_RS06360 | Not Available | Positive | 1613496 - 1614155 | 23733.4 |
| outer membrane protein assembly factor bamb | I596_RS06365 | Q8P980 | Positive | 1614155 - 1615354 | 42228.5 |
| ribosome biogenesis gtpase der | I596_RS06370 | B2FNR1 | Positive | 1615452 - 1616852 | 50810.3 |
| molybdenum cofactor guanylyltransferase | I596_RS06375 | B7VNT9 | Positive | 1616875 - 1617480 | 20616.8 |
| gephyrin-like molybdotransferase glp | I596_RS06380 | P12281 | Positive | 1617455 - 1618717 | 43402.4 |
| glycosyltransferase | I596_RS06385 | Not Available | Positive | 1618714 - 1619712 | 36907.6 |
| molybdopterin-synthase adenylyltransferase moeb | I596_RS06390 | D4GSF3 | Positive | 1619763 - 1620878 | 38702.5 |
| hypothetical protein | I596_RS18720 | Not Available | Negative | 1620912 - 1621088 | 6952.57 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS06395 | Q9X5V3 | Negative | 1621208 - 1623502 | 78945.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
