Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family metallopeptidase | I596_RS06100 | Not Available | Negative | 1556554 - 1557366 | 28066.3 |
| dihydroorotase | I596_RS06105 | Q9HMH9 | Negative | 1557372 - 1558706 | 49461.9 |
| membrane protein insertion efficiency factor yidd | I596_RS06110 | Q87EM1 | Negative | 1558699 - 1558971 | 10275.7 |
| rna polymerase-binding protein dksa | I596_RS18035 | P0CAU3 | Positive | 1559069 - 1560013 | 33787.7 |
| phosphoglucosamine mutase | I596_RS06125 | Q4UWC8 | Positive | 1560102 - 1561454 | 47208.5 |
| isopenicillin n synthase family oxygenase | I596_RS06130 | Q1ERI0 | Positive | 1561451 - 1562389 | 34897.5 |
| triose-phosphate isomerase | I596_RS06135 | Q4UWC0 | Positive | 1562647 - 1563399 | 25674.7 |
| preprotein translocase subunit secg | I596_RS06140 | Not Available | Positive | 1563446 - 1563904 | 14925.0 |
| Trna-leu | Not Available | Not Available | Positive | 1563910 - 1563994 | Not Available |
| nadh-quinone oxidoreductase subunit a | I596_RS06150 | B5EN71 | Positive | 1564065 - 1564421 | 13336.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
