Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4242 domain-containing protein | I596_RS06045 | Not Available | Positive | 1544388 - 1544660 | 9810.66 |
| nadp-dependent oxidoreductase | I596_RS06050 | P76113 | Positive | 1544777 - 1545796 | 35610.2 |
| sdr family oxidoreductase | I596_RS06055 | O07575 | Negative | 1545806 - 1546804 | 35316.2 |
| hypothetical protein | I596_RS06060 | Not Available | Negative | 1547062 - 1548375 | 46638.0 |
| hypothetical protein | I596_RS06065 | Not Available | Negative | 1548510 - 1549139 | 22748.4 |
| cupin domain-containing protein | I596_RS06075 | Not Available | Positive | 1549386 - 1549751 | 13552.1 |
| abc transporter atp-binding protein/permease | I596_RS06080 | Q2HIE9 | Negative | 1550264 - 1552048 | 65305.2 |
| duf4399 domain-containing protein | I596_RS06085 | Not Available | Positive | 1552279 - 1552686 | 14158.0 |
| right-handed parallel beta-helix repeat-containing protein | I596_RS06090 | Not Available | Negative | 1552667 - 1554232 | 52822.1 |
| bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | I596_RS06095 | P26265 | Negative | 1554321 - 1556378 | 73279.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
