Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase | I596_RS05945 | Not Available | Positive | 1521164 - 1522585 | 49685.5 |
| ykgj family cysteine cluster protein | I596_RS05950 | P31004 | Negative | 1522664 - 1523023 | 12473.8 |
| s41 family peptidase | I596_RS05955 | P12661 | Negative | 1523122 - 1524399 | 45044.1 |
| beta-ketoacyl-acp synthase i | I596_RS05960 | Q02K94 | Negative | 1524500 - 1525708 | 41725.7 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase faba | I596_RS05965 | Q3BP41 | Negative | 1525712 - 1526227 | 19021.1 |
| alpha/beta hydrolase | I596_RS05970 | Not Available | Positive | 1526696 - 1527550 | 30789.2 |
| 2'-5' rna ligase family protein | I596_RS05975 | Not Available | Positive | 1527622 - 1528191 | 20297.6 |
| dipeptidyl-peptidase 3 family protein | I596_RS05980 | Q8L831 | Negative | 1528210 - 1529889 | 60639.1 |
| mechanosensitive ion channel family protein | I596_RS05985 | Not Available | Negative | 1529955 - 1530518 | 21127.2 |
| abc transporter permease | I596_RS05990 | Not Available | Negative | 1530587 - 1532977 | 83941.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
