Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS05895 | Not Available | Positive | 1512637 - 1512963 | 12162.3 |
| hypothetical protein | I596_RS05900 | Not Available | Positive | 1513063 - 1514799 | 64221.3 |
| hypothetical protein | I596_RS05905 | Not Available | Positive | 1514801 - 1516144 | 49519.0 |
| giy-yig nuclease family protein | I596_RS05910 | Q8PHP7 | Negative | 1516102 - 1516440 | 12106.3 |
| hypothetical protein | I596_RS05915 | Not Available | Positive | 1516764 - 1517498 | 25758.3 |
| rna polymerase sigma factor | I596_RS05920 | Not Available | Positive | 1517505 - 1518005 | 18410.1 |
| hypothetical protein | I596_RS05925 | Not Available | Positive | 1517992 - 1518624 | 22801.8 |
| m56 family metallopeptidase | I596_RS05930 | Not Available | Negative | 1518799 - 1520076 | 44958.5 |
| blai/meci/copy family transcriptional regulator | I596_RS05935 | O07127 | Negative | 1520066 - 1520434 | 13810.6 |
| dksa/trar family c4-type zinc finger protein | I596_RS05940 | P41039 | Positive | 1520751 - 1521017 | 9592.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
