Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf72 domain-containing protein | I596_RS05765 | Not Available | Positive | 1469167 - 1469952 | 28858.7 |
| sam-dependent methyltransferase | I596_RS05770 | Q58630 | Positive | 1470054 - 1470941 | 31737.7 |
| winged helix-turn-helix domain-containing protein | I596_RS05775 | Not Available | Positive | 1471202 - 1472839 | 58289.6 |
| serine hydrolase | I596_RS05780 | Not Available | Negative | 1472906 - 1474036 | 41038.7 |
| caspase family protein | I596_RS05785 | Not Available | Positive | 1474035 - 1476341 | 81505.7 |
| alpha/beta fold hydrolase | I596_RS05790 | Not Available | Positive | 1476338 - 1477216 | 32374.4 |
| raqprd family integrative conjugative element protein | I596_RS05795 | Not Available | Negative | 1477742 - 1478017 | 10002.0 |
| hypothetical protein | I596_RS05800 | Not Available | Negative | 1478295 - 1478801 | 18780.6 |
| hypothetical protein | I596_RS18430 | Not Available | Negative | 1479100 - 1479576 | 16804.1 |
| hypothetical protein | I596_RS18435 | Not Available | Negative | 1480441 - 1480776 | 12402.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
