Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | I596_RS05620 | Not Available | Negative | 1437514 - 1438323 | 29597.0 |
| serine hydrolase | I596_RS05625 | Q8NUZ4 | Positive | 1438425 - 1439807 | 48593.1 |
| glutathione s-transferase family protein | I596_RS05630 | Not Available | Negative | 1439883 - 1440542 | 24323.4 |
| voc family protein | I596_RS05635 | Not Available | Negative | 1440569 - 1441048 | 17209.3 |
| hypothetical protein | I596_RS18700 | Not Available | Negative | 1441466 - 1441624 | 5921.09 |
| nuclease-related domain-containing protein | I596_RS05640 | Not Available | Negative | 1441628 - 1442530 | 33138.7 |
| adp-ribosylation/crystallin j1 | I596_RS05645 | Not Available | Positive | 1442739 - 1443086 | 13310.9 |
| rdd family protein | I596_RS05650 | Not Available | Positive | 1443198 - 1444139 | 34247.1 |
| ig-like domain-containing protein | I596_RS05655 | Not Available | Positive | 1444376 - 1447729 | 114802.0 |
| rna-binding s4 domain-containing protein | I596_RS05660 | P0ACH0 | Positive | 1447931 - 1448350 | 15353.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
