Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS05535 | Not Available | Negative | 1416899 - 1417558 | 24202.3 |
| m48 family metallopeptidase | I596_RS05540 | Q9P7G4 | Negative | 1417677 - 1418471 | 27641.0 |
| methylmalonyl-coa mutase family protein | I596_RS05545 | Q5KUG0 | Positive | 1418616 - 1422149 | 130700.0 |
| hypothetical protein | I596_RS05550 | Not Available | Positive | 1422574 - 1423302 | 26369.7 |
| copg family transcriptional regulator | I596_RS18020 | Not Available | Positive | 1423393 - 1423608 | 7809.29 |
| dna cytosine methyltransferase | I596_RS05555 | O34680 | Positive | 1423605 - 1424852 | 45233.7 |
| very short patch repair endonuclease | I596_RS18025 | Q9JWD6 | Positive | 1424930 - 1425331 | 15417.6 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS18920 | Not Available | Positive | 1425563 - 1425673 | 3987.93 |
| transposase | I596_RS05560 | Not Available | Negative | 1425748 - 1426467 | 27420.9 |
| hypothetical protein | I596_RS05565 | Not Available | Positive | 1426706 - 1427758 | 37851.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
