Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| right-handed parallel beta-helix repeat-containing protein | I596_RS05435 | Not Available | Negative | 1394368 - 1395876 | 50052.7 |
| atp-binding cassette domain-containing protein | I596_RS05440 | Not Available | Negative | 1395990 - 1397873 | 68585.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | I596_RS05445 | Not Available | Positive | 1398017 - 1398745 | 25689.7 |
| udp-glucose/gdp-mannose dehydrogenase family protein | I596_RS05450 | O86422 | Positive | 1398856 - 1400196 | 47629.9 |
| duf1800 family protein | I596_RS05455 | Not Available | Positive | 1400349 - 1402109 | 64866.9 |
| duf1501 domain-containing protein | I596_RS05460 | Not Available | Positive | 1402124 - 1403467 | 46876.4 |
| gdp-mannose 4,6-dehydratase | I596_RS05465 | Q56598 | Positive | 1403727 - 1404863 | 42320.4 |
| slyx family protein | I596_RS05470 | A4VNB1 | Positive | 1404860 - 1405075 | 8145.6 |
| duf2058 domain-containing protein | I596_RS05475 | Not Available | Positive | 1405082 - 1405687 | 21629.8 |
| hypothetical protein | I596_RS05480 | Not Available | Positive | 1405995 - 1406477 | 17058.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
