Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase | I596_RS05240 | Not Available | Negative | 1350239 - 1351510 | 45971.6 |
| polysaccharide deacetylase family protein | I596_RS05245 | Not Available | Negative | 1351529 - 1352602 | 39931.2 |
| j domain-containing protein | I596_RS05250 | Not Available | Positive | 1352897 - 1353559 | 22866.4 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | I596_RS05255 | Not Available | Positive | 1353611 - 1354222 | 22978.6 |
| glycosyltransferase | I596_RS05260 | Not Available | Positive | 1354215 - 1355408 | 43019.7 |
| nad-dependent epimerase/dehydratase family protein | I596_RS05265 | Q8EG63 | Positive | 1355426 - 1357495 | 73733.0 |
| acyltransferase | I596_RS05270 | Not Available | Negative | 1357570 - 1358595 | 37727.5 |
| glycosyltransferase | I596_RS05275 | O32272 | Positive | 1358756 - 1359931 | 41811.3 |
| asparagine synthase (glutamine-hydrolyzing) | I596_RS05280 | B6HLP8 | Positive | 1359939 - 1361861 | 70999.8 |
| acyl carrier protein | I596_RS05285 | Not Available | Positive | 1361945 - 1362193 | 9090.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
