Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase gale | I596_RS05190 | Q59083 | Positive | 1337463 - 1338443 | 34736.5 |
| hypothetical protein | I596_RS05195 | Not Available | Positive | 1338480 - 1340165 | 61738.3 |
| heparinase ii/iii family protein | I596_RS05200 | Not Available | Negative | 1340398 - 1342110 | 62395.3 |
| glycosyltransferase family a protein | I596_RS05205 | Q1RIM7 | Negative | 1342390 - 1343301 | 33427.2 |
| glycosyltransferase family 2 protein | I596_RS05210 | O32268 | Negative | 1343298 - 1344089 | 29110.4 |
| hypothetical protein | I596_RS05215 | Not Available | Negative | 1344086 - 1345285 | 45094.3 |
| polysaccharide deacetylase family protein | I596_RS05220 | Q8DP63 | Negative | 1345466 - 1346107 | 24290.2 |
| glycosyltransferase | I596_RS05225 | Not Available | Negative | 1346208 - 1347335 | 39828.9 |
| phenylacetate--coa ligase family protein | I596_RS05230 | Not Available | Negative | 1347332 - 1348690 | 51235.7 |
| oligosaccharide flippase family protein | I596_RS05235 | Not Available | Negative | 1348707 - 1350242 | 53939.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
