Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | I596_RS05145 | Not Available | Positive | 1322815 - 1327851 | 179624.0 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS05150 | P24577 | Negative | 1328374 - 1328628 | 9667.05 |
| hypothetical protein | I596_RS18425 | Not Available | Negative | 1328696 - 1328968 | 9921.73 |
| drug/metabolite exporter yeda | I596_RS05155 | P0AA72 | Negative | 1329286 - 1330194 | 31329.9 |
| nucleotide sugar dehydrogenase | I596_RS05160 | Q04972 | Positive | 1330541 - 1331833 | 47012.3 |
| nad-dependent epimerase | I596_RS05165 | Q04871 | Positive | 1331847 - 1332854 | 37081.1 |
| xrta/pep-cterm system exopolysaccharide export protein | I596_RS05170 | Q48450 | Positive | 1333046 - 1333624 | 20693.0 |
| xrta system polysaccharide chain length determinant | I596_RS05175 | Not Available | Positive | 1333639 - 1335192 | 58275.2 |
| polysaccharide biosynthesis protein | I596_RS05180 | Not Available | Positive | 1335189 - 1335971 | 28118.8 |
| outer membrane beta-barrel protein | I596_RS05185 | Not Available | Positive | 1336064 - 1337353 | 48193.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
