Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | I596_RS05095 | P94177 | Negative | 1309122 - 1312328 | 112370.0 |
| hypothetical protein | I596_RS05100 | Not Available | Negative | 1312336 - 1313280 | 31846.1 |
| tolc family protein | I596_RS05105 | Not Available | Negative | 1313277 - 1314689 | 49957.3 |
| hypothetical protein | I596_RS18690 | Not Available | Negative | 1314989 - 1315156 | 5554.0 |
| reprolysin-like metallopeptidase | I596_RS05115 | Not Available | Negative | 1315224 - 1317206 | 68538.3 |
| hypothetical protein | I596_RS05120 | Not Available | Negative | 1317432 - 1317857 | 14821.2 |
| efflux rnd transporter periplasmic adaptor subunit | I596_RS05125 | D2BTK6 | Positive | 1317957 - 1319186 | 43334.7 |
| abc transporter atp-binding protein | I596_RS05130 | Q9WYI7 | Positive | 1319270 - 1319959 | 24497.7 |
| abc transporter permease | I596_RS05135 | Not Available | Positive | 1320045 - 1321208 | 41928.2 |
| abc transporter permease | I596_RS05140 | Not Available | Positive | 1321222 - 1322529 | 45842.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
