Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | I596_RS05045 | Q9WVJ3 | Negative | 1291937 - 1293382 | 49535.3 |
| sialidase family protein | I596_RS05050 | Not Available | Positive | 1293563 - 1296406 | 95807.5 |
| large-conductance mechanosensitive channel protein mscl | I596_RS05055 | B4STT2 | Negative | 1297258 - 1297677 | 14856.6 |
| efflux rnd transporter permease subunit | I596_RS05060 | Not Available | Negative | 1297737 - 1300964 | 113986.0 |
| efflux rnd transporter periplasmic adaptor subunit | I596_RS05065 | Not Available | Negative | 1301000 - 1302010 | 34973.1 |
| tolc family protein | I596_RS05070 | Not Available | Negative | 1302010 - 1303275 | 45073.4 |
| hypothetical protein | I596_RS05075 | Not Available | Negative | 1303331 - 1303681 | 12160.2 |
| fumarylacetoacetate hydrolase family protein | I596_RS05080 | Q2HJ98 | Negative | 1303720 - 1304406 | 23945.7 |
| protein kinase domain-containing protein | I596_RS05085 | P54740 | Negative | 1304519 - 1307233 | 98837.7 |
| hypothetical protein | I596_RS05090 | Not Available | Positive | 1307521 - 1309179 | 56840.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
