Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0149 family protein | I596_RS04995 | Q9PBX5 | Positive | 1279159 - 1279704 | 19078.3 |
| xaa-pro aminopeptidase | I596_RS05000 | P15034 | Positive | 1279806 - 1281116 | 49481.9 |
| class i fructose-bisphosphate aldolase | I596_RS05005 | Q8P5Z7 | Positive | 1281288 - 1282298 | 36123.3 |
| duf6498-containing protein | I596_RS05010 | Not Available | Negative | 1282308 - 1282976 | 24124.7 |
| nyn domain-containing protein | I596_RS05015 | Not Available | Positive | 1283049 - 1283792 | 27182.4 |
| efflux rnd transporter periplasmic adaptor subunit | I596_RS05020 | D4I6V2 | Positive | 1284085 - 1285149 | 36803.1 |
| efflux rnd transporter permease subunit | I596_RS05025 | Not Available | Positive | 1285202 - 1288327 | 112369.0 |
| gnat family n-acetyltransferase | I596_RS05030 | Not Available | Positive | 1288324 - 1288869 | 20010.9 |
| trmh family rna methyltransferase | I596_RS05035 | P0AGJ6 | Positive | 1288880 - 1289728 | 29802.8 |
| hypothetical protein | I596_RS05040 | Not Available | Negative | 1289898 - 1291850 | 68772.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
