Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3016 domain-containing protein | I596_RS04945 | Not Available | Negative | 1262585 - 1263139 | 20666.5 |
| sensor histidine kinase | I596_RS04950 | Q9I0I2 | Negative | 1263272 - 1264567 | 46418.1 |
| response regulator transcription factor | I596_RS04955 | Q9I0I1 | Negative | 1264564 - 1265238 | 24941.0 |
| pepsy domain-containing protein | I596_RS18420 | Not Available | Negative | 1265238 - 1265939 | 25653.5 |
| pepsy domain-containing protein | I596_RS04965 | Not Available | Positive | 1266061 - 1266711 | 22471.2 |
| cdp-alcohol phosphatidyltransferase family protein | I596_RS04970 | Not Available | Negative | 1266760 - 1267386 | 21509.6 |
| prolyl oligopeptidase family serine peptidase | I596_RS04975 | Q8VZF3 | Positive | 1267548 - 1270013 | 89870.7 |
| methionine adenosyltransferase | I596_RS04980 | Q4UR08 | Negative | 1270885 - 1272084 | 43618.0 |
| pepsy domain-containing protein | I596_RS04985 | Not Available | Positive | 1272412 - 1274151 | 62272.9 |
| eal domain-containing protein | I596_RS04990 | Not Available | Negative | 1274386 - 1278900 | 165661.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
