Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | I596_RS04895 | Not Available | Negative | 1250964 - 1251983 | 36863.4 |
| hypothetical protein | I596_RS04900 | Not Available | Negative | 1251980 - 1252888 | 32721.8 |
| duf58 domain-containing protein | I596_RS04905 | Not Available | Negative | 1252885 - 1253766 | 31496.6 |
| moxr family atpase | I596_RS04910 | P30621 | Negative | 1253786 - 1254829 | 38403.2 |
| methanol dehydrogenase | I596_RS04915 | P14775 | Negative | 1254948 - 1255259 | 11196.4 |
| cytochrome c(l), periplasmic | I596_RS04920 | P14774 | Negative | 1255360 - 1255926 | 20520.4 |
| methanol oxidation system protein moxj | I596_RS04925 | P16028 | Negative | 1255971 - 1256819 | 30739.0 |
| methanol/ethanol family pqq-dependent dehydrogenase | I596_RS04930 | P16027 | Negative | 1256887 - 1258746 | 68336.9 |
| sigma-54 dependent transcriptional regulator | I596_RS04935 | Q00934 | Negative | 1259432 - 1260847 | 50664.3 |
| hypothetical protein | I596_RS04940 | Not Available | Negative | 1260969 - 1262459 | 50835.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
