Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mitochondrial fission elm1 family protein | I596_RS04850 | Not Available | Positive | 1240140 - 1241123 | 34472.5 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS18005 | Not Available | Positive | 1241763 - 1241924 | 6357.7 |
| azurin | I596_RS04855 | P00279 | Negative | 1242127 - 1242570 | 15628.0 |
| pqq-dependent dehydrogenase, methanol/ethanol family | I596_RS04860 | P29968 | Positive | 1243100 - 1244893 | 65780.7 |
| quinoprotein dehydrogenase-associated putative abc transporter substrate-binding protein | I596_RS04865 | P29900 | Positive | 1245051 - 1246709 | 58864.4 |
| cytochrome c | I596_RS04870 | Not Available | Positive | 1246768 - 1247328 | 19458.1 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS04875 | Not Available | Positive | 1247562 - 1248449 | 30921.7 |
| srpbcc family protein | I596_RS04880 | Not Available | Negative | 1248864 - 1249391 | 19012.2 |
| vwa domain-containing protein | I596_RS04885 | Not Available | Negative | 1249388 - 1250389 | 35657.7 |
| hypothetical protein | I596_RS04890 | Not Available | Negative | 1250386 - 1250967 | 21176.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
