Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf-type sigma factor | I596_RS00460 | Not Available | Negative | 121886 - 122449 | 20556.6 |
| 2-hydroxychromene-2-carboxylate isomerase | I596_RS00465 | Not Available | Positive | 122538 - 123167 | 22538.0 |
| tetr/acrr family transcriptional regulator | I596_RS00470 | Not Available | Negative | 123216 - 123884 | 24491.1 |
| efflux rnd transporter periplasmic adaptor subunit | I596_RS00475 | Q8G2M7 | Positive | 124086 - 125300 | 43309.4 |
| efflux rnd transporter permease subunit | I596_RS00480 | Q8G2M6 | Positive | 125375 - 128563 | 113744.0 |
| mfs transporter | I596_RS00485 | Q4ZY49 | Positive | 128596 - 129819 | 42524.6 |
| mfs transporter | I596_RS00490 | P11545 | Positive | 129954 - 131516 | 54298.1 |
| sdr family oxidoreductase | I596_RS00495 | P14802 | Positive | 131578 - 132306 | 25350.3 |
| duf4124 domain-containing protein | I596_RS00500 | Not Available | Positive | 132344 - 133000 | 23041.2 |
| methylated-dna--[protein]-cysteine s-methyltransferase | I596_RS00505 | Q8TI34 | Negative | 133016 - 133570 | 20420.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
