Rhodococcoides fascians strain PBTS 2

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcoides

Description

Rhodococcoides fascians strain PBTS 2 is a Gram-positive bacterium characterized by its cocci shape. This strain possesses a single replicon, which is indicative of its genomic structure. It has been identified as a host-associated organism, specifically associated with Arabidopsis thaliana, a model plant in scientific research. The accession number for this strain is NZ_CP015220.1, which provides a reference for its genetic and genomic information. The association with Arabidopsis thaliana suggests that Rhodococcoides fascians strain PBTS 2 may play a role in plant-microbe interactions, possibly influencing plant growth or health. From a biological and ecological perspective, the relationship between Rhodococcoides fascians strain PBTS 2 and Arabidopsis thaliana could indicate its potential involvement in plant development or response to environmental stressors. Understanding such relationships is crucial for insights into microbial ecology, particularly in the context of agricultural practices and plant health management. Further study into this strain may reveal more about its specific functions and contributions to the plant host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcoides
SpeciesRhodococcoides fascians
Strainstrain PBTS 2

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcoides fascians strain PBTS 2 chromosome, complete genome.

Gene Summary

Adenine Count

910101 bp

Thymine Count

920099 bp

Guanine Count

1678415 bp

Cytosine Count

1670738 bp

Genome Length

5179353 bp

Protein-coding Genes

4830 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coa-acylating methylmalonate-semialdehyde dehydrogenaseA3Q41_RS00410Not AvailableNegative79414 - 8092253900.1
swim zinc finger family proteinA3Q41_RS00415Not AvailableNegative80996 - 8174827203.9
dead/deah box helicaseA3Q41_RS00420Not AvailableNegative81748 - 84591104081.0
nadp-dependent oxidoreductaseA3Q41_RS00425Not AvailablePositive84703 - 8560230181.8
hnh endonuclease family proteinA3Q41_RS00430Not AvailablePositive85698 - 8641425484.0
shikimate 5-dehydrogenaseA3Q41_RS00435Not AvailablePositive86451 - 8727828623.7
glucosamine-6-phosphate deaminaseA3Q41_RS00440Not AvailableNegative87280 - 8807428383.2
n-acetylglucosamine-6-phosphate deacetylaseA3Q41_RS00445Not AvailableNegative88075 - 8925940265.7
pts transporter subunit eiicA3Q41_RS00450Not AvailableNegative89256 - 9050344659.0
glucose pts transporter subunit eiibA3Q41_RS00455Not AvailablePositive90681 - 909117740.29

Displaying genes 81 – 90 of 4891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.