Rhodococcoides fascians strain PBTS 2

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcoides

Description

Rhodococcoides fascians strain PBTS 2 is a Gram-positive bacterium characterized by its cocci shape. This strain possesses a single replicon, which is indicative of its genomic structure. It has been identified as a host-associated organism, specifically associated with Arabidopsis thaliana, a model plant in scientific research. The accession number for this strain is NZ_CP015220.1, which provides a reference for its genetic and genomic information. The association with Arabidopsis thaliana suggests that Rhodococcoides fascians strain PBTS 2 may play a role in plant-microbe interactions, possibly influencing plant growth or health. From a biological and ecological perspective, the relationship between Rhodococcoides fascians strain PBTS 2 and Arabidopsis thaliana could indicate its potential involvement in plant development or response to environmental stressors. Understanding such relationships is crucial for insights into microbial ecology, particularly in the context of agricultural practices and plant health management. Further study into this strain may reveal more about its specific functions and contributions to the plant host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcoides
SpeciesRhodococcoides fascians
Strainstrain PBTS 2

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcoides fascians strain PBTS 2 chromosome, complete genome.

Gene Summary

Adenine Count

910101 bp

Thymine Count

920099 bp

Guanine Count

1678415 bp

Cytosine Count

1670738 bp

Genome Length

5179353 bp

Protein-coding Genes

4830 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cyclic nucleotide-degrading phosphodiesteraseA3Q41_RS22945Not AvailableNegative4888150 - 488890826927.7
rhomboid family intramembrane serine proteaseA3Q41_RS22950Not AvailableNegative4889021 - 488960220448.1
p1 family peptidaseA3Q41_RS22955Not AvailableNegative4889703 - 489078836156.9
duf2017 domain-containing proteinA3Q41_RS22960Not AvailableNegative4890798 - 489136720311.0
atp-dependent clp protease adapter clpsA3Q41_RS22965Not AvailableNegative4891416 - 489177513019.4
nicotinate phosphoribosyltransferaseA3Q41_RS22970Not AvailablePositive4891926 - 489318244011.4
atp-dependent dna helicaseA3Q41_RS22975Not AvailablePositive4893232 - 489528072375.9
alpha-glucan family phosphorylaseA3Q41_RS22980Not AvailableNegative4895288 - 489781992161.4
maltotransferase domain-containing proteinA3Q41_RS22985Not AvailablePositive4898024 - 490003074874.0
1,4-alpha-glucan branching protein glgbA3Q41_RS22990Not AvailablePositive4900042 - 490224381191.9

Displaying genes 4631 – 4640 of 4891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.