Rhodococcoides fascians strain PBTS 2

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcoides

Description

Rhodococcoides fascians strain PBTS 2 is a Gram-positive bacterium characterized by its cocci shape. This strain possesses a single replicon, which is indicative of its genomic structure. It has been identified as a host-associated organism, specifically associated with Arabidopsis thaliana, a model plant in scientific research. The accession number for this strain is NZ_CP015220.1, which provides a reference for its genetic and genomic information. The association with Arabidopsis thaliana suggests that Rhodococcoides fascians strain PBTS 2 may play a role in plant-microbe interactions, possibly influencing plant growth or health. From a biological and ecological perspective, the relationship between Rhodococcoides fascians strain PBTS 2 and Arabidopsis thaliana could indicate its potential involvement in plant development or response to environmental stressors. Understanding such relationships is crucial for insights into microbial ecology, particularly in the context of agricultural practices and plant health management. Further study into this strain may reveal more about its specific functions and contributions to the plant host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcoides
SpeciesRhodococcoides fascians
Strainstrain PBTS 2

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcoides fascians strain PBTS 2 chromosome, complete genome.

Gene Summary

Adenine Count

910101 bp

Thymine Count

920099 bp

Guanine Count

1678415 bp

Cytosine Count

1670738 bp

Genome Length

5179353 bp

Protein-coding Genes

4830 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit nuohA3Q41_RS18245Not AvailablePositive3836019 - 383729946278.4
nadh-quinone oxidoreductase subunit nuoiA3Q41_RS18250Not AvailablePositive3837292 - 383783719959.5
nadh-quinone oxidoreductase subunit jA3Q41_RS18255Not AvailablePositive3837834 - 383860126945.0
nadh-quinone oxidoreductase subunit nuokA3Q41_RS18260Not AvailablePositive3838598 - 383889711016.9
nadh-quinone oxidoreductase subunit lA3Q41_RS18265Not AvailablePositive3838914 - 384078565442.0
nadh-quinone oxidoreductase subunit mA3Q41_RS18270Not AvailablePositive3840782 - 384232054418.9
nadh-quinone oxidoreductase subunit nuonA3Q41_RS18275Not AvailablePositive3842317 - 384387953581.4
duf4188 domain-containing proteinA3Q41_RS18280Not AvailableNegative3843891 - 384437017511.8
tetr/acrr family transcriptional regulatorA3Q41_RS18285Not AvailablePositive3844451 - 384504420904.9
ydcf family proteinA3Q41_RS18290Not AvailableNegative3845038 - 384596131601.1

Displaying genes 3681 – 3690 of 4891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.