Rhodococcoides fascians strain PBTS 2

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcoides

Description

Rhodococcoides fascians strain PBTS 2 is a Gram-positive bacterium characterized by its cocci shape. This strain possesses a single replicon, which is indicative of its genomic structure. It has been identified as a host-associated organism, specifically associated with Arabidopsis thaliana, a model plant in scientific research. The accession number for this strain is NZ_CP015220.1, which provides a reference for its genetic and genomic information. The association with Arabidopsis thaliana suggests that Rhodococcoides fascians strain PBTS 2 may play a role in plant-microbe interactions, possibly influencing plant growth or health. From a biological and ecological perspective, the relationship between Rhodococcoides fascians strain PBTS 2 and Arabidopsis thaliana could indicate its potential involvement in plant development or response to environmental stressors. Understanding such relationships is crucial for insights into microbial ecology, particularly in the context of agricultural practices and plant health management. Further study into this strain may reveal more about its specific functions and contributions to the plant host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcoides
SpeciesRhodococcoides fascians
Strainstrain PBTS 2

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcoides fascians strain PBTS 2 chromosome, complete genome.

Gene Summary

Adenine Count

910101 bp

Thymine Count

920099 bp

Guanine Count

1678415 bp

Cytosine Count

1670738 bp

Genome Length

5179353 bp

Protein-coding Genes

4830 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna degradosome polyphosphate kinaseA3Q41_RS17555Not AvailableNegative3691585 - 369370578650.1
2-phospho-l-lactate guanylyltransferaseA3Q41_RS17560Not AvailableNegative3693878 - 369465726861.4
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseA3Q41_RS17565Not AvailablePositive3694777 - 369577534028.6
d-alanine--d-alanine ligase family proteinA3Q41_RS17570Not AvailablePositive3695849 - 369695538833.0
duf3515 domain-containing proteinA3Q41_RS17575Not AvailableNegative3696963 - 369758621203.5
lrp/asnc ligand binding domain-containing proteinA3Q41_RS17580Not AvailableNegative3697590 - 36978388630.29
thiamine-phosphate kinaseA3Q41_RS17585Not AvailablePositive3698072 - 369903132326.0
gamma carbonic anhydrase family proteinA3Q41_RS17590Not AvailablePositive3699070 - 369959417949.4
uracil-dna glycosylaseA3Q41_RS17595Not AvailablePositive3699591 - 370028324768.6
enoyl-coa hydratase/isomerase family proteinA3Q41_RS17600Not AvailableNegative3700289 - 370108326774.5

Displaying genes 3541 – 3550 of 4891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.